The detailed information of tRNA gene sequence


Sequence ID>ENV08000795
Genome IDABMJ01030283
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 113
End posion on genome 37
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnnctaa
tRNA gene sequence 
CGGGTAGTAGAGGAGTGGTTTATCTCGCTGGCTTTGGAAGCTAGAGCACGTGGGTTCGAA
TCCCGCCTACCCGACAA
Downstream region at tRNA end position 
agaatactct
Secondary structure (Cloverleaf model)
>ENV08000795	Pro	TGG
                   a      ACAA agaatactct
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     C G C C C     A
      T G A        A      | + | | |     G
    G       G G A G       G T G G G     C
    G       + | | |                 T T
    T       T C T C
      T T A        G     AGCAC
                    C - G
                    T - A
                    G + T
                    G - C
                    C - G
                  T       A
                  T       A
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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