The detailed information of tRNA gene sequence


Sequence ID>ENV08000801
Genome IDABMJ01038652
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 28
End posion on genome 103
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgtgttagtT
tRNA gene sequence 
AGGGCTGTAGCTCAATTGGTTAGAGCGCTTGATTGTCGATCAAGAGGTTGCGGGTTCGAG
TCCCGTCAGTCCTGTtt
Downstream region at tRNA end position 
ttagggggta
Secondary structure (Cloverleaf model)
>ENV08000801	Asp	GTC
                   T      GTtt ttagggggta
                     A - T
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTT
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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