The detailed information of tRNA gene sequence


Sequence ID>ENV08000802
Genome IDABMJ01039041
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 102
End posion on genome 17
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position
ggtggttatt
tRNA gene sequence
GGATAGATGGGGGAGTGGTTAAACCCAACAGACTGTAAATCTGTCGCCTTACGGCTTCGT
AGGTTCAAATCCTACTCTGTCCACCA
Downstream region at tRNA end position
atagtttata
Secondary structure (Cloverleaf model)
>ENV08000802	Tyr	GTA
                   t      ACCA atagtttata
                     G - C
                     G - C
                     A - T
                     T + G
                     A - T
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    G       G G G G       G T A G G     C
    G         | | |                 T T
    T       A C C C
      T A A        A     CGCCTTACGGCTTC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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