The detailed information of tRNA gene sequence


Sequence ID>ENV08000805
Genome IDABMJ01041734
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 105
End posion on genome 30
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtttanatgt
tRNA gene sequence 
ATCCCAGTAGCTCAATCGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGTAGGTTCAAGT
CCTACCTGCGATGCCA
Downstream region at tRNA end position 
aatttatatt
Secondary structure (Cloverleaf model)
>ENV08000805	Trp	CCA
                   t      GCCA aatttatatt
                     A - T
                     T - A
                     C - G
                     C   C
                     C - G
                     A - T
                     G - C          T G
                    T     C A T C C     A
      T A A        A      | | | | |     A
    C       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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