The detailed information of tRNA gene sequence


Sequence ID>ENV08000808
Genome IDABMJ01045928
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 73
End posion on genome 2
Amino Acid Pseudo
Anticodon TTG
Upstream region at tRNA start position 
ccgctaaaaa
tRNA gene sequence 
TGAGATATGATGTAAAGGTAGCATAGAAAACTTTGACTTTTCTTGTATAGGTTCGACCCC
TATTATCTCAACan
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08000808	Pseudo	TTG
                   a      ACan nnnnnnnnnn
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     A - T          C C
                    T     T A T C C     A
        A A        G      | | | | |     G
      A     T G T A       A T A G G     C
      G     + | | |                 T T
      G     G C A T
        T A        A     TTGT
                    G - C
                    A - T
                    A - T
                    A - T
                    A - T
                  C       C
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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