The detailed information of tRNA gene sequence


Sequence ID>ENV08000811
Genome IDABMJ01047791
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 11
End posion on genome 84
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
taatttaatt
tRNA gene sequence 
GGGGGTTTGGTGTAATGGTAGCACCGCAGATTTTGATTCTGTTAGCGAGGGTTCGACTCC
CTCATCCCCTGCCA
Downstream region at tRNA end position 
attttgtctg
Secondary structure (Cloverleaf model)
>ENV08000811	Gln	TTG
                   t      GCCA attttgtctg
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     T   T
                     T - A          T C
                    T     C T C C C     A
        A A        G      | | | | |     G
      T     T G T G       G A G G G     C
      G     + | | |                 T T
      G     G C A C
        T A        C     TAGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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