The detailed information of tRNA gene sequence


Sequence ID>ENV08000815
Genome IDABMJ01050665
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 10
End posion on genome 83
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ntaatttaat
tRNA gene sequence 
TGGGGGTTTGTGTAATGGTAGCACCGCAGATTTTGATTCTGTTAGCGAGGGTTCGACTCC
CTCATCCCCTGCCA
Downstream region at tRNA end position 
attttgtctg
Secondary structure (Cloverleaf model)
>ENV08000815	Gln	TTG
                   t      GCCA attttgtctg
                     T   T
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A          T C
                    T     C T C C C     A
        A A        T      | | | | |     G
      T     T G T G       G A G G G     C
      G     + | | |                 T T
      G     G C A C
        T A        C     TAGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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