The detailed information of tRNA gene sequence


Sequence ID>ENV08000817
Genome IDABMJ01056263
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 84
End posion on genome 10
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
tcctgtttat
tRNA gene sequence
GCCTCGTTCGTATAGTGGTTATTACGCCGGATTGTCGATCCGAATACAAGAGTTCGATTC
TCTTACAAGGCGCCA
Downstream region at tRNA end position
agttattgtn
Secondary structure (Cloverleaf model)
>ENV08000817	Asp	GTC
                   t      GCCA agttattgtn
                     G - C
                     C - G
                     C - G
                     T - A
                     C   A
                     G - C
                     T - A          T T
                    T     T T C T C     A
      T G A        C      | | | | |     G
    G       T A T G       A A G A G     C
    G         | | |                 T T
    T       T T A C
      T A          G     ATAC
                    C   A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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