The detailed information of tRNA gene sequence


Sequence ID>ENV08000818
Genome IDABMJ01056371
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 95
End posion on genome 21
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position
gtaaactatc
tRNA gene sequence
GGTCCACTAGCTTAATGGNTAAAGCCAGAGTCTTCTAAACTCTTGATCCGTGTTCGATTC
ACGGGTGGACCTCCA
Downstream region at tRNA end position
attggggacg
Secondary structure (Cloverleaf model)
>ENV08000818	Arg	TCT
                   c      TCCA attggggacg
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     A - T
                     C - G          T T
                    T     G G C A C     A
      T A A        A      | | | | |     G
    G       T T C G       C C G T G     C
    G       | | | |                 T T
    N       A A G C
      T A          C     TGAT
                    A - T
                    G - C
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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