The detailed information of tRNA gene sequence


Sequence ID>ENV08000821
Genome IDABMJ01064614
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 21
End posion on genome 95
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ccttgttaat
tRNA gene sequence
GGGAGAGTAGCCAAGAGGTAAGGCAAGAATTTCATAAGTTCTGCATCGCAGGTTCGAATC
CTGCCTCTCCCACCA
Downstream region at tRNA end position
ctcaacgggg
Secondary structure (Cloverleaf model)
>ENV08000821	Met	CAT
                   t      ACCA ctcaacgggg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C G T C C     A
        G A        A      | | | | |     G
      A     A C C G       G C A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GCATC
                    A - T
                    G - C
                    A - T
                    A - T
                    T + G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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