The detailed information of tRNA gene sequence


Sequence ID>ENV08000822
Genome IDABMJ01066114
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 5
End posion on genome 78
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nnnnnnattt
tRNA gene sequence 
GCCCTTCTCGTATAATGGTATTACATCGGTTTTGTAATCCGATTATGGCAGTTCGATTCT
GTCGAGGGGCACCA
Downstream region at tRNA end position 
tataaaaaca
Secondary structure (Cloverleaf model)
>ENV08000822	Thr	TGT
                   t      ACCA tataaaaaca
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     T - A
                     C - G          T T
                    T     C T G T C     A
        A A        C      | + | | |     G
      T     T A T G       G G C A G     C
      G       | | |                 T T
      G     T T A C
        T A        A     TTAT
                    T - A
                    C - G
                    G - C
                    G - C
                    T   T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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