The detailed information of tRNA gene sequence


Sequence ID>ENV08000832
Genome IDABMJ01100002
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 28
End posion on genome 103
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
caccttatat
tRNA gene sequence 
GCGGAAGTAGCTCAATTGGTAGAGCTCCTGCCTTCCAAGCAGGTTGTTGCGGGTTCGAGT
CCCGTCTTCCGCTCTA
Downstream region at tRNA end position 
gaannnnnnn
Secondary structure (Cloverleaf model)
>ENV08000832	Gly	TCC
                   t      TCTA gaannnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          T     TTGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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