The detailed information of tRNA gene sequence


Sequence ID>ENV08000833
Genome IDABMJ01103340
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 94
End posion on genome 10
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
caacttacat
tRNA gene sequence 
GCGACTGTGGTGGAATTGGTAGTCACAGCAGACTTAAAATCTGCCGGAGTAATCCGTGTC
GGTTCGAGTCCGACCAGTCGTACCA
Downstream region at tRNA end position 
tatttagcan
Secondary structure (Cloverleaf model)
>ENV08000833	Leu	TAA
                   t      ACCA tatttagcan
                     G + T
                     C - G
                     G - C
                     A - T
                     C - G
                     T - A
                     G - C          T G
                    T     C A G C C     A
      T A A        G      | | | | |     G
    T       G G T G       G T C G G     C
    G       + | | |                 T T
    G       T C A C
      T A G        A     CGGAGTAATCCGT
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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