The detailed information of tRNA gene sequence


Sequence ID>ENV08000842
Genome IDABMJ01133234
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 103
End posion on genome 29
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
nnnnnnnnnn
tRNA gene sequence
CTGTGCGTAGCGCAGTGGTAGCGCGCGGGCTTTGGAAGCTTGAGGTCGTAGGTTCGATCC
CTACCGCACAGACCA
Downstream region at tRNA end position
gtaattcatc
Secondary structure (Cloverleaf model)
>ENV08000842	Pro	TGG
                   n      ACCA gtaattcatc
                     C - G
                     T - A
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C          C T
                    T     C A T C C     A
        G A        A      | | | | |     G
      T     C G C G       G T A G G     C
      G     | | | |                 T T
      G     G C G C
        T A        G     AGGTC
                    C - G
                    G + T
                    G + T
                    G - C
                    C - G
                  T       A
                  T       A
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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