The detailed information of tRNA gene sequence


Sequence ID>ENV08000844
Genome IDABMJ01155087
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 26
End posion on genome 101
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
cgagatttac
tRNA gene sequence 
GTGTGGATGGTGAGGCGGGTGCTCACACTGGCTTGAAACCCCAGAGACGAAGGTTCGAGT
CCTTCTCCACACACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08000844	Phe	GAA
                   c      ACCA nnnnnnnnnn
                     G - C
                     T - A
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T          T G
                    T     C T T C C     A
      C G G        G      | | | | |     G
    G       A G T G       G A A G G     C
    G       | | | |                 T T
    G       T C A C
      T G C        A     AGAC
                    C - G
                    T - A
                    G - C
                    G - C
                    C   C
                  T       C
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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