The detailed information of tRNA gene sequence


Sequence ID>ENV08000849
Genome IDABMJ01201311
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 87
End posion on genome 14
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nntgattgat
tRNA gene sequence 
GATGGGGTGCCCGAATGGTTAGGGAGCGGATTGCAAATCCGCCCATGTGAGTTCGATCCT
CACCCTCATCTCCA
Downstream region at tRNA end position 
tgctgactaa
Secondary structure (Cloverleaf model)
>ENV08000849	Cys	GCA
                   t      TCCA tgctgactaa
                     G - C
                     A - T
                     T - A
                     G - C
                     G + T
                     G - C
                     G - C          C T
                    T     C A C T C     A
        A A        G      | | | | |     G
      T     G C C C       G T G A G     C
      G       | | |                 T T
      G     A G G G
        T T        A     CCAT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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