The detailed information of tRNA gene sequence


Sequence ID>ENV08000852
Genome IDABMJ01217285
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 12
End posion on genome 87
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
agctatttta
tRNA gene sequence 
GCTGCTATAGCTCATCAGGCAGAGCGCCACACTTGTAATGTGGATGTGCGGGGTTCGAGT
CCTCGTGGCAGCACCA
Downstream region at tRNA end position 
gttttcnnnn
Secondary structure (Cloverleaf model)
>ENV08000852	Thr	TGT
                   a      ACCA gttttcnnnn
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     T + G
                     A - T          T G
                    T     G C T C C     A
      C T A        A      | | + | |     G
    A       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     ATGTG
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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