The detailed information of tRNA gene sequence


Sequence ID>ENV08000854
Genome IDABMJ01229729
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 12
End posion on genome 87
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tgtctaattt
tRNA gene sequence 
CTGCCCGTAGCTCAGTGGAAGAGCCGCCGCCTTCTAAGCGGATACGGCGGGGGTTCGAAT
CCCTCCGGGCAGGCCA
Downstream region at tRNA end position 
tgcnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08000854	Arg	TCT
                   t      GCCA tgcnnnnnnn
                     C - G
                     T - A
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
        G A        A      | + | | |     G
      T     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        A A        C     TACGGC
                    G   A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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