The detailed information of tRNA gene sequence


Sequence ID>ENV08000873
Genome IDABMK01166720
Search identical group
Phylum/Classmarine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 82
End posion on genome 10
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gatagtacaa
tRNA gene sequence 
GGCTCTGTAGCTCAGTGGTTAGAGCGGAGGATTCATAAGCCTTAGGTCGTAGGTTCAAAT
CCCACCAGAGCCAtct
Downstream region at tRNA end position 
attcctnnnn
Secondary structure (Cloverleaf model)
>ENV08000873	Met	CAT
                   a      Atct attcctnnnn
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C A C C C     A
      T G A        A      | |   | |     A
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A   G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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