The detailed information of tRNA gene sequence


Sequence ID>ENV08000884
Genome IDABML01018833
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 109
End posion on genome 36
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ataaataagg
tRNA gene sequence 
CGCGGGGTAGCCAAGTGGTAAGGCAGGTCTCTGCAAAAGACCTATCGTCGGTTCGATTCC
GACCCTCGCGTCCA
Downstream region at tRNA end position 
taattttaat
Secondary structure (Cloverleaf model)
>ENV08000884	Cys	GCA
                   g      TCCA taattttaat
                     C - G
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     G - C          T T
                    T     C A G C C     A
        G A        A      | | | | |     G
      T     A C C G       G T C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G - C
                    G - C
                    T - A
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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