The detailed information of tRNA gene sequence


Sequence ID>ENV08000886
Genome IDABML01026315
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 12
End posion on genome 86
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cgcaacatga
tRNA gene sequence 
TCCGGGGTAGTTCAATGGTAGAACGTCCGACTGTTAATCGGGTGGTTGTTGGTTCGAGTC
CAGCTCCCGGAGCCA
Downstream region at tRNA end position 
aaaaaaacgc
Secondary structure (Cloverleaf model)
>ENV08000886	Asn	GTT
                   a      GCCA aaaaaaacgc
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T G
                    T     C G A C C     A
        A A        A      | + | | |     G
      T     C T T G       G T T G G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     TGGTT
                    T + G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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