The detailed information of tRNA gene sequence


Sequence ID>ENV08000892
Genome IDABML01038095
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 120
End posion on genome 46
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position
nnnnnnnnnn
tRNA gene sequence
GGGCTCATAGTTAAGAGGATATAACCTCCGCCTTCTAAGCGGATGTCCCTGGTTCGATTC
CAGGTGAGCCTGCCT
Downstream region at tRNA end position
tgcggaatta
Secondary structure (Cloverleaf model)
>ENV08000892	Arg	TCT
                   n      GCCT tgcggaatta
                     G + T
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T T
                    T     G G A C C     A
      A G A        A      | | | | |     G
    G       A T T G       C C T G G     C
    G       | | | |                 T T
    A       T A A C
      T A          C     TGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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