The detailed information of tRNA gene sequence


Sequence ID>ENV08000894
Genome IDABML01051496
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 108
End posion on genome 36
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tacattttat
tRNA gene sequence 
GCCCCTGTAGCTCAATTGGTAGAGCAACGGTTTTGTAAACCGTAGGTTGTAGGTTCAAGT
CCTATCAGTGGCTttc
Downstream region at tRNA end position 
ccaattaggg
Secondary structure (Cloverleaf model)
>ENV08000894	Thr	TGT
                   t      Tttc ccaattaggg
                     G - C
                     C - G
                     C - G
                     C   T
                     C - G
                     T - A
                     G - C          T G
                    T     T A T C C     A
      T A A        A      + | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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