The detailed information of tRNA gene sequence


Sequence ID>ENV08000895
Genome IDABML01056902
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 105
End posion on genome 19
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
atataattag
tRNA gene sequence 
GGCTAAGTGGTGGAATTGGTATACACAGCAGTCTCAAAAACTGCCGCCAATAATGGCTTG
TCGGTTCGAGTCCGACCTTAGCTACCA
Downstream region at tRNA end position 
aataaagggg
Secondary structure (Cloverleaf model)
>ENV08000895	Leu	CAA
                   g      ACCA aataaagggg
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T
                     A - T
                     G - C          T G
                    T     C A G C C     A
      T A A        G      | | | | |     G
    T       G G T G       G T C G G     C
    G         | | |                 T T
    G       A C A C
      T A T        A     CGCCAATAATGGCTT
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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