The detailed information of tRNA gene sequence


Sequence ID>ENV08000896
Genome IDABML01061528
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 109
End posion on genome 33
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnntatattt
tRNA gene sequence 
GCTCCCGTAGCTCAGTTGGTTAGAGCAGGCGGCTCATAACCGCTCGGTCGTAGGTTCAAG
TCCTACCGGGAGTACCA
Downstream region at tRNA end position 
aaggagatta
Secondary structure (Cloverleaf model)
>ENV08000896	Met	CAT
                   t      ACCA aaggagatta
                     G + T
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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