The detailed information of tRNA gene sequence


Sequence ID>ENV08000898
Genome IDABML01066553
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 1
End posion on genome 94
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
TGGGAGGTGGCGGAATTGGCAGACGCGCCATCCTGTTTCGATTGTGGTGATAACGTGAAA
ACGCACTTTGTAGGTTCGAATCCTACCCTTCCAGtat
Downstream region at tRNA end position 
taccccttag
Secondary structure (Cloverleaf model)
>ENV08000898	Asn	GTT
                   n      Gtat taccccttag
                     T - A
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T A A        G      | | | | |     G
    T       G G C G       G T A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGTGATAACGTGAAAACGCACTTT
                    C - G
                    C   T
                    A - T
                    T - A
                    C - G
                  C       C
                  T       T
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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