The detailed information of tRNA gene sequence


Sequence ID>ENV08000900
Genome IDABML01069710
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 12
End posion on genome 83
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aaataattaa
tRNA gene sequence 
AGGAGGTTAGCTCAGTTGGAGAGCATCTCGCTTACACCGAGACGGTCGCTGGTTCGAGTC
CAGTACCTCCTAtgt
Downstream region at tRNA end position 
tccgggctct
Secondary structure (Cloverleaf model)
>ENV08000900	Val	TAC
                   a      Atgt tccgggctct
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A          T G
                    T     T G A C C     A
        G A        A      + | | | |     G
      T     C T C G       G C T G G     C
      T     | | | |                 T T
      G     G A G C
        G A        A     CGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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