The detailed information of tRNA gene sequence


Sequence ID>ENV08000905
Genome IDABML01096354
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 37
End posion on genome 112
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gtcctaccat
tRNA gene sequence 
GCTCCCGTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTGGGTCATAGGTTCGAG
TCCTATCGGGAGTGCCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08000905	Arg	TCT
                   t      GCCn nnnnnnnnnn
                     G + T
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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