The detailed information of tRNA gene sequence


Sequence ID>ENV08000909
Genome IDABML01126776
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 108
End posion on genome 37
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnnnnnnnng
tRNA gene sequence 
GGTAGATTAGCTCAGCGGTAGAGCTATTCGTTTACACCGAATCGGTCACTGGTTCGATCC
CAGTATCTCCCAttt
Downstream region at tRNA end position 
tcataaggtt
Secondary structure (Cloverleaf model)
>ENV08000909	Val	TAC
                   g      Attt tcataaggtt
                     G - C
                     G - C
                     T   C
                     A - T
                     G - C
                     A - T
                     T - A          C T
                    T     T G A C C     A
        G A        A      | | | | |     G
      C     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        T     CGGTC
                    A - T
                    T - A
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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