The detailed information of tRNA gene sequence


Sequence ID>ENV08000917
Genome IDABML01160035
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 98
End posion on genome 25
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ngaattcaaT
tRNA gene sequence 
GGGTGTGTGGTGTAATGGATAGCATCTTGGCCTTCTAAGCCGAGGATAGGGGTTCGATTC
CTCTCACGCCCGTtt
Downstream region at tRNA end position 
aattttcaaa
Secondary structure (Cloverleaf model)
>ENV08000917	Arg	TCT
                   T      GTtt aattttcaaa
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     T - A
                     G - C          T T
                    T     T C T C C     A
      T A A        G      | | + | |     G
    G       T G T G       A G G G G     C
    G       + | | +                 T T
    A       G C A T
      T A          C     GGAT
                    T - A
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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