The detailed information of tRNA gene sequence


Sequence ID>ENV08000919
Genome IDABML01164913
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 106
End posion on genome 34
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGATCTGTAGCTCAACGGTAGTAGCAGGAGACTTTTAATCTCTTGGTTGCGGGTTCGAAT
CCCTCCAGATTCAatc
Downstream region at tRNA end position 
tcataacaac
Secondary structure (Cloverleaf model)
>ENV08000919	Lys	TTT
                   n      Aatc tcataacaac
                     G - C
                     G + T
                     A - T
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
      C A A        A      |   | | |     G
    G       C T C G       G C G G G     C
    G         | | |                 T T
    T       T A G C
      A G          A     TGGTT
                    G + T
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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