The detailed information of tRNA gene sequence


Sequence ID>ENV08000925
Genome IDABML01205835
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 27
End posion on genome 102
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgttatattt
tRNA gene sequence 
GGACCTATAGCTCAATGGTCAGAGCATCCGGCTCATAACCGGCAGGTTCTTGGTTCGAGT
CCAAGTGGGTCCACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08000925	Met	CAT
                   t      ACCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G A A C C     A
      T A A        A      | | | | |     G
    G       C T C G       C T T G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     AGGTT
                    T   C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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