The detailed information of tRNA gene sequence


Sequence ID>ENV08000929
Genome IDABML01255524
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 96
End posion on genome 24
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position
nnnnnnnnnn
tRNA gene sequence
GGGACTATAGCTCAATTGGTAGAGCAGCGGCCTTTTAAGCCGAGGGTTCAGGGTTCGAGT
CCCTGTGGTCCCAtac
Downstream region at tRNA end position
tttaaaactg
Secondary structure (Cloverleaf model)
>ENV08000929	Lys	TTT
                   n      Atac tttaaaactg
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     A - T          T G
                    T     G T C C C     A
      T A A        A      | | | | |     G
    T       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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