The detailed information of tRNA gene sequence


Sequence ID>WENV183724116
Genome IDPJQE01000034
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 2468
End posion on genome 2543
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cagggcacgT
tRNA gene sequence 
CGCGGGGTGGAGCAGCCTGGTAGCTCGTCTGGTTCATTTCCAGAAGGTCATCGGTTCAAA
TCCGGTCCCCGCCATag
Downstream region at tRNA end position 
aaacacagca
Secondary structure (Cloverleaf model)
>WENV183724116	fMet	CAT
                   T      ATag aaacacagca
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G G C C     A
      C G A        G      | + | | |     A
    C       C G A G       A T C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       T
                  T       T
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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