The detailed information of tRNA gene sequence


Sequence ID>WENV183724175
Genome IDPJQE01000998
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 2881
End posion on genome 2789
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcctgccgag
tRNA gene sequence 
cGGAGCGGCATGGGCCCGGTGGCCCAGCGGGTCTTCAAAACTCGTGCGGTCGTGTAGCCC
ACGGCTCGGGGGGTTCGACTCCCTCGCCGCTCCGtttc
Downstream region at tRNA end position 
cgcgtcagcg
Secondary structure (Cloverleaf model)
>WENV183724175	SeC	TCA
                   g      tttc cgcgtcagcg
                     c - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          C T
                    C     G C T C C     C
      C C C        A        | + |       A
    G       G G G T       G G G G T     G
    G       | | | |                 T C
    T       C C C A
      G G          G     TGCGGTCGTGTAGCCCACGGCTCGG
                    C - G
                    G - C
                    G + T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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