The detailed information of tRNA gene sequence


Sequence ID>WENV183724179
Genome IDPJQE01001016
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 1585
End posion on genome 1661
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atgatgggtt
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCCAGTTCAAA
TCTGGCCCCCGCAACCA
Downstream region at tRNA end position 
cgggctcagt
Secondary structure (Cloverleaf model)
>WENV183724179	fMet	CAT
                   t      ACCA cgggctcagt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G T C     A
      T G A        G      | | | | |     A
    C       C G A G       G C C A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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