The detailed information of tRNA gene sequence


Sequence ID>WENV183724202
Genome IDPJQE01001102
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 266
End posion on genome 177
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagcgcctcc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCTTAAGGCGCACGCTTGGAAAGCGTGTGTGCGGGAAACCGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
cccgctcttc
Secondary structure (Cloverleaf model)
>WENV183724202	Ser	GGA
                   c      GCCA cccgctcttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGTGCGGGAAACCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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