The detailed information of tRNA gene sequence


Sequence ID>WENV183724221
Genome IDPJQE01001907
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 233
End posion on genome 141
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acttgcgcac
tRNA gene sequence 
GGAGAGGTGTCTGAGCGGTTGAAAGAGCCCGCCTCGAAAGCGGGTAGCCTGGCAAAACCG
GGCTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tgatttttgc
Secondary structure (Cloverleaf model)
>WENV183724221	Ser	CGA
                   c      GCCA tgatttttgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C T       G T G G G     C
    G         | | |                 T T
    T       A A G A
      T G A        G     TAGCCTGGCAAAACCGGGCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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