The detailed information of tRNA gene sequence


Sequence ID>WENV183724278
Genome IDPJQE01004294
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 302
End posion on genome 395
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atctttacac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCTCGCCTGCTAAGCGAGTAAGGGGGCTTAAACC
TCCTTCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
cacacattgt
Secondary structure (Cloverleaf model)
>WENV183724278	Ser	GCT
                   c      GCCA cacacattgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAAGGGGGCTTAAACCTCCTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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