The detailed information of tRNA gene sequence


Sequence ID>WENV183724301
Genome IDPJQE01005643
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 1334
End posion on genome 1258
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
acactaggat
tRNA gene sequence 
GCGCCCGTAGCTCAGTCGGAAAGAGCGTCTGCCTTCTAAGCAGAGGGTCGGGGGTTCGAA
TCCCTCCGGGCGCGCCA
Downstream region at tRNA end position 
ttcttttcaa
Secondary structure (Cloverleaf model)
>WENV183724301	Arg	TCT
                   t      GCCA ttcttttcaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A A A        G     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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