The detailed information of tRNA gene sequence


Sequence ID>WENV183724359
Genome IDPJQE01009384
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 228
End posion on genome 139
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gggctctcgc
tRNA gene sequence 
GGAGGGATGGTCGAGTGGTTTAAGGCACCGGTCTTGAAAACCGGCGTGGGTGCAAGCCCA
CCGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
gcgcaaattg
Secondary structure (Cloverleaf model)
>WENV183724359	Ser	TGA
                   c      GCCA gcgcaaattg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G G G     C
    G         | + |                 T T
    T       A G G C
      T T A        A     CGTGGGTGCAAGCCCACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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