The detailed information of tRNA gene sequence


Sequence ID>WENV183724370
Genome IDPJQE01010131
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 1338
End posion on genome 1414
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
caggctcagt
tRNA gene sequence 
CGCGAGGTGGAGCAGTCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
aaaacaacag
Secondary structure (Cloverleaf model)
>WENV183724370	fMet	CAT
                   t      ACCA aaaacaacag
                     C   T
                     G - C
                     C - G
                     G - C
                     A   C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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