The detailed information of tRNA gene sequence


Sequence ID>WENV183724383
Genome IDPJQE01011095
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 584
End posion on genome 676
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcacgctcc
tRNA gene sequence 
GGAGACGTGGCCGAGAGGCTGAAGGCGGCGGTTTGCTAAATCGTTATACCCTCTAAAGGG
GTATCAGGGGTTCGAATCCCCTCGTCTCCGCCA
Downstream region at tRNA end position 
ttttggctca
Secondary structure (Cloverleaf model)
>WENV183724383	Ser	GCT
                   c      GCCA ttttggctca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C C C C     A
      A G A        G      | | | | |     G
    G       G C C G       A G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACCCTCTAAAGGGGTATC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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