The detailed information of tRNA gene sequence


Sequence ID>WENV183724397
Genome IDPJQE01011587
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 265
End posion on genome 175
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gatacggcac
tRNA gene sequence 
GGAGATGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTAAGGGTCAAAAGCCC
TTCACAGGTTCGAATCCTGTCATCTCCGCCA
Downstream region at tRNA end position 
gattttttaa
Secondary structure (Cloverleaf model)
>WENV183724397	Ser	GCT
                   c      GCCA gattttttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
      T G A        G      | | | | |     G
    G       G C C G       A C A G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TAAGGGTCAAAAGCCCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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