The detailed information of tRNA gene sequence


Sequence ID>WENV183724509
Genome IDPJQE01024426
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 133
End posion on genome 44
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
actccttgct
tRNA gene sequence 
GGAGGAGTGGCCGAGCGGTTGAAGGCGGCGGTCTTGAAAACCGTTAGGCCCGAAAGGGTC
TCGGGGGTTCGAATCCCTCCTCCTCCGCCA
Downstream region at tRNA end position 
cattcttcta
Secondary structure (Cloverleaf model)
>WENV183724509	Ser	TGA
                   t      GCCA cattcttcta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TAGGCCCGAAAGGGTCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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