The detailed information of tRNA gene sequence


Sequence ID>WENV183724626
Genome IDPJQE01036461
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 362
End posion on genome 286
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tgaagtttga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCGGGTTCAAA
TCCCGCCCCCGCAACCA
Downstream region at tRNA end position 
acatcattgg
Secondary structure (Cloverleaf model)
>WENV183724626	fMet	CAT
                   a      ACCA acatcattgg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C G G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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