The detailed information of tRNA gene sequence


Sequence ID>WENV183724651
Genome IDPJQE01040628
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 519
End posion on genome 427
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agtgagcccc
tRNA gene sequence 
GGAGAGATGCCCGAGAGGCCGAAGGGGGCGCCCTGCTAAGGCGTTATACGGGCAAAACCC
GTATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gatacgaaaa
Secondary structure (Cloverleaf model)
>WENV183724651	Ser	GCT
                   c      GCCA gatacgaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TATACGGGCAAAACCCGTATC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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