The detailed information of tRNA gene sequence


Sequence ID>WENV183724743
Genome IDPJQE01059749
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 188
End posion on genome 99
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgggtcggc
tRNA gene sequence 
GGAGCTGTGGCCGAGTGGTCGAAGGCACACCCCTGCTAAGGGTGCAGACGGGGAACCGTC
TCGAGGGTTCGAATCCCTTCGGCTCCGCCA
Downstream region at tRNA end position 
ctttcagata
Secondary structure (Cloverleaf model)
>WENV183724743	Ser	GCT
                   c      GCCA ctttcagata
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T + G
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CAGACGGGGAACCGTCTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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