The detailed information of tRNA gene sequence


Sequence ID>WENV183724864
Genome IDPJQE01086435
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 255
End posion on genome 344
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aataaggccc
tRNA gene sequence 
GGAGAGGTCGCATAGTGGATTAGTGCACCGGTCTCGAAAACCGGAGTGGGTTAACGCCCA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ctacattgcc
Secondary structure (Cloverleaf model)
>WENV183724864	Ser	CGA
                   c      GCCA ctacattgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    A       G T G C
      T T A        A     AGTGGGTTAACGCCCACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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