The detailed information of tRNA gene sequence


Sequence ID>WENV183724887
Genome IDPJQE01090833
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 393
End posion on genome 303
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gccttcacgc
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCGTAACGGGGGCGCCTCGAAAGCGTCTTGTCGCGCAAGCGG
CACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
atacttaaat
Secondary structure (Cloverleaf model)
>WENV183724887	Ser	CGA
                   c      GCCA atacttaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTGTCGCGCAAGCGGCAC
                    G - C
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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